Lemna minor, Tandem duplication DB
Notice
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Retrieve tandemly duplicated genes from query geneset
Statistical test is performed to test whether tandemly duplicated genes are enriched in query geneset
Note that the completeness of L.minor genome is relatively low. This DB would be continuously updated along with genome improvement
DB source :
COGE
This work was supported by a grant from the Next-Generation BioGreen 21 Program (SSAC, grant# : PJ01389002), Rural Development Administration, Republic of Korea.
Gene names:
Lminor_016770.mRNA1 Lminor_003583.mRNA1 Lminor_019921.mRNA1 Lminor_005427.mRNA1 Lminor_000171.mRNA1 Lminor_010663.mRNA1 Lminor_008506.mRNA1 Lminor_012900.mRNA1 Lminor_002476.mRNA1 Lminor_009848.mRNA1 Lminor_017703.mRNA1 Lminor_015154.mRNA1 Lminor_013761.mRNA1 Lminor_001693.mRNA1 Lminor_004730.mRNA1 Lminor_005023.mRNA1 Lminor_009201.mRNA1 Lminor_012080.mRNA1 Lminor_002553.mRNA1 Lminor_019921.mRNA1
# of tandem
# of nontandem
Query gene set
Whole gene set
Stats
Fisher's exact test
The tandem duplicates enriched with significance of p-value,
Tandem in Query
Representative homolog
Tandem list
Annotation
